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Computing Kitchen
Everyday computational science
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Andrew Dolgert
Computational scientist / software architect
Google scholar profile
Curriculum vitae
Blog
and an
older blog
Github
Stochastic processes and simulation
Continuous-time paper
Discrete stochastic models in continuous time for ecology
Simulation of Gene Drives
Simulation of farm-to-farm infection process for the USDA
Simulation of a cattle feedlot for the USDA
C++ framework
Python framework
Julia framework
Provenance
Provenance in High Energy Physics paper
Python tools
R tools
Provenance prototype for process-level recording using logstash and elastic search
Big data forecasting, demography, time series
Estimation of spatial population on simplices
Demography from gridded population surfaces
Global estimation of a compartmental model of mortality
Forecasting life expectancy, years of life lost, and all-cause and cause-specific mortality for 250 causes of death: reference and alternative scenarios for 2016–40 for 195 countries and territories
Fertility, mortality, migration, and population scenarios for 195 countries and territories from 2017 to 2100: a forecasting analysis for the Global Burden of Disease Study
Distributed, parallel, high-performance computing
Digital Material: a flexible atomistic simulation code
Fracture Mechanics on the Intel R ItaniumTM Architecture (A Case Study)
Texas Advanced Computing Center User Guides
- Most of my NSF-funded training materials became part of these
Maximizing Computational Learning for Faculty and Student Scientists: The Ranger Virtual Workshop